1 |
Bigler, J., Boedigheimer, M., Schofield, J.P.R., et al. 2017. A Severe Asthma Disease Signature from Gene Expression Profiling of Peripheral Blood from U-BIOPRED Cohorts. American Journal of Respiratory and Critical Care Medicine 195, 10, 1311–1320.
|
|
2 |
Chatkin, J., Correa, L., and Santos, U. 2022. External Environmental Pollution as a Risk Factor for Asthma. Clinical Reviews in Allergy & Immunology 62, 1, 72–89.
|
|
3 |
Checkley, W. 2019. What have we learnt from studies on the association between urbanisation and asthma prevalence? Thorax 74, 11, 1011–1012.
|
|
4 |
Clough, E. and Barrett, T. 2016. The Gene Expression Omnibus Database. In: E. Mathé and S. Davis, eds., Statistical Genomics: Methods and Protocols. Springer, New York, NY, 93–110.
|
|
5 |
Cremades-Jimeno, L., de Pedro, M.Á., López-Ramos, M., et al. 2021. Prioritizing Molecular Biomarkers in Asthma and Respiratory Allergy Using Systems Biology. Frontiers in Immunology 12.
|
|
6 |
Demšar, J., Curk, T., Erjavec, A., et al. 2013. Orange: Data Mining Toolbox in Python. Journal of Machine Learning Research 14, 71, 2349–2353.
|
|
7 |
Dweik, R.A., Boggs, P.B., Erzurum, S.C., et al. 2011. An Official ATS Clinical Practice Guideline: Interpretation of Exhaled Nitric Oxide Levels (FeNO) for Clinical Applications. American Journal of Respiratory and Critical Care Medicine 184, 5, 602–615.
|
|
8 |
Fawcett, K.A., Demidov, G., Shrine, N., et al. 2022. Exome-wide analysis of copy number variation shows association of the human leukocyte antigen region with asthma in UK Biobank. BMC Medical Genomics 15, 119.
|
|
9 |
Ghosh, D. 2002. Singular value decomposition regression models for classification of tumors from microarray experiments. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 18–29.
|
|
10 |
Goldin, J., Hashmi, M.F., and Cataletto, M.E. 2025. Asthma. In: StatPearls. StatPearls Publishing, Treasure Island (FL).
|
|
11 |
Hamid, Q., Tulic’, M.K., Liu, M.C., and Moqbel, R. 2003. Inflammatory cells in asthma: mechanisms and implications for therapy. The Journal of Allergy and Clinical Immunology 111, 1 Suppl, S5–S12; discussion S12-17.
|
|
12 |
Hernandez‐Pacheco, N., Farzan, N., Francis, B., et al. 2019. Genome‐wide association study of inhaled corticosteroid response in admixed children with asthma. Clinical & Experimental Allergy 49, 6, 789–798.
|
|
13 |
Jakiela, B., Soja, J., Sladek, K., et al. 2023. Bronchial epithelial cell transcriptome shows endotype heterogeneity of asthma in patients with NSAID-exacerbated respiratory disease. Journal of Allergy and Clinical Immunology 151, 4, 953–965.
|
|
14 |
Jurkiewicz, M.M., Mueller-Alcazar, A., Moser, D.A., et al. 2021. Integrated microRNA and mRNA gene expression in peripheral blood mononuclear cells in response to acute psychosocial stress: a repeated-measures within-subject pilot study. BMC Research Notes 14, 222.
|
|
15 |
Lee, M., Lim, S., Kim, Y.S., et al. 2022. DEP-induced ZEB2 promotes nasal polyp formation via epithelial-to-mesenchymal transition. Journal of Allergy and Clinical Immunology 149, 1, 340–357.
|
|
16 |
Leslie, E., Miller, M., Lafuze, A., Svyatskaya, S., Choi, G.-S., and Broide, D.H. 2024. PGAP3 regulates human bronchial epithelial cell mRNAs present in asthma and respiratory virus reference data sets. medRxiv, 2024.07.03.24309917.
|
|
17 |
Liu, L., Yang, C., Li, Y., et al. 2025. EPAS1 amplifies asthma pathogenesis through JAK2/STAT3-mediated ferroptosis and inflammation. Biomolecules and Biomedicine.
|
|
18 |
Liu, X.-Y., Wu, S.-B., Zeng, W.-Q., Yuan, Z.-J., and Xu, H.-B. 2020. LogSum + L2 penalized logistic regression model for biomarker selection and cancer classification. Scientific Reports 10, 1, 22125.
|
|
19 |
Marcolino, L.S., Couto, B.R., and dos Santos, M.A. 2010. Genome visualization in space. Springer, 225–232.
|
|
20 |
Modena, B.D., Bleecker, E.R., Busse, W.W., et al. 2017. Gene Expression Correlated with Severe Asthma Characteristics Reveals Heterogeneous Mechanisms of Severe Disease. American Journal of Respiratory and Critical Care Medicine 195, 11, 1449–1463.
|
|
21 |
Mohammed, I., Elbashir, M.K., and Faggad, A.S. 2024. Singular Value Decomposition-Based Penalized Multinomial Regression for Classifying Imbalanced Medulloblastoma Subgroups Using Methylation Data. Journal of Computational Biology: A Journal of Computational Molecular Cell Biology 31, 5, 458–471.
|
|
22 |
Morais-Rodrigues, F., Silv́erio-Machado, R., Kato, R.B., et al. 2020. Analysis of the microarray gene expression for breast cancer progression after the application modified logistic regression. Gene 726, 144168.
|
|
23 |
Mori, Y., Yokota, H., Hoshino, I., et al. 2021. Deep learning-based gene selection in comprehensive gene analysis in pancreatic cancer. Scientific Reports 11, 1, 16521.
|
|
24 |
Ni, R., Su, H., Burnett, R.T., Guo, Y., and Cheng, Y. 2024. Long-term exposure to PM2.5 has significant adverse effects on childhood and adult asthma: A global meta-analysis and health impact assessment. One Earth 7, 11, 1953–1969.
|
|
25 |
Orsmark-Pietras, C., James, A., Konradsen, J.R., et al. 2013. Transcriptome analysis reveals upregulation of bitter taste receptors in severe asthmatics. The European Respiratory Journal 42, 1, 65–78.
|
|
26 |
Price, D.B., Rigazio, A., Campbell, J.D., et al. 2015. Blood eosinophil count and prospective annual asthma disease burden: a UK cohort study. The Lancet Respiratory Medicine 3, 11, 849–858.
|
|
27 |
Ren, Y., Liu, Y., Wang, S., et al. 2021. Zhike pingchuan granules improve bronchial asthma by regulating the IL-6/JAK2/STAT3 pathway. Experimental and Therapeutic Medicine 22, 2, 899.
|
|
28 |
Skloot, G.S. 2016. Asthma phenotypes and endotypes: a personalized approach to treatment. Current Opinion in Pulmonary Medicine 22, 1, 3–9.
|
|
29 |
Vishnyakova, P., Kuznetsova, M., Poltavets, A., et al. 2022. Distinct gene expression patterns for CD14++ and CD16++ monocytes in preeclampsia. Scientific Reports 12, 1, 15469.
|
|
30 |
Vos, T., Lim, S.S., Abbafati, C., et al. 2020. Global burden of 369 diseases and injuries in 204 countries and territories, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019. The Lancet 396, 10258, 1204–1222.
|
|
31 |
Zheng, X.-Y., Xu, Y.-J., Guan, W.-J., and Lin, L.-F. 2018. Regional, age and respiratory-secretion-specific prevalence of respiratory viruses associated with asthma exacerbation: a literature review. Archives of Virology 163, 4, 845–853.
|
|